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Cluster: HRGMv2_1677_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1677_6 HRGMv2_1677_6_15 13431 15275 + GT2
CAZyme HRGMv2_1677_6 HRGMv2_1677_6_16 15481 16431 - GT2
TC HRGMv2_1677_6 HRGMv2_1677_6_17 16431 17198 - 3.A.1.103.1
TC HRGMv2_1677_6 HRGMv2_1677_6_18 17229 18068 - 3.A.1.103.6
TC HRGMv2_1677_6 HRGMv2_1677_6_19 18172 19371 - 9.B.183.1.9
NULL(UNKNOWN) HRGMv2_1677_6 HRGMv2_1677_6_20 19680 19805 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1677_6 HRGMv2_1677_6_21 19947 20480 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1677_6 HRGMv2_1677_6_22 20525 22384 - 3.A.1.135.5
TC HRGMv2_1677_6 HRGMv2_1677_6_23 22385 24145 - 3.A.1.135.5
TC HRGMv2_1677_6 HRGMv2_1677_6_24 24277 24711 - 1.A.22.1.8
Gene ID: HRGMv2_1677_6_15
Type: CAZyme
Location: 13431 - 15275 (+)
Gene ID: HRGMv2_1677_6_16
Type: CAZyme
Location: 15481 - 16431 (-)
Gene ID: HRGMv2_1677_6_17
Type: TC
Location: 16431 - 17198 (-)
Gene ID: HRGMv2_1677_6_18
Type: TC
Location: 17229 - 18068 (-)
Gene ID: HRGMv2_1677_6_19
Type: TC
Location: 18172 - 19371 (-)
Gene ID: HRGMv2_1677_6_20
Type:
Location: 19680 - 19805 (+)
Gene ID: HRGMv2_1677_6_21
Type:
Location: 19947 - 20480 (-)
Gene ID: HRGMv2_1677_6_22
Type: TC
Location: 20525 - 22384 (-)
Gene ID: HRGMv2_1677_6_23
Type: TC
Location: 22385 - 24145 (-)
Gene ID: HRGMv2_1677_6_24
Type: TC
Location: 24277 - 24711 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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