Cluster: HRGMv2_1677_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1677
- CGC Family ID: CGCFAM_00309
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1677_5 | HRGMv2_1677_5_38 | 22212 | 23837 | + | 3.A.1.26.5 |
| TC | HRGMv2_1677_5 | HRGMv2_1677_5_39 | 23827 | 24612 | + | 3.A.1.26.7 |
| pfam | HRGMv2_1677_5 | HRGMv2_1677_5_40 | 24620 | 25495 | + | PseudoU_synth_1 |
| NULL(UNKNOWN) | HRGMv2_1677_5 | HRGMv2_1677_5_41 | 25602 | 26357 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1677_5 | HRGMv2_1677_5_42 | 26609 | 27688 | + | GT2 |
Gene ID: HRGMv2_1677_5_38
Type: TC
Location: 22212 - 23837 (+)
Type: TC
Location: 22212 - 23837 (+)
Gene ID: HRGMv2_1677_5_39
Type: TC
Location: 23827 - 24612 (+)
Type: TC
Location: 23827 - 24612 (+)
Gene ID: HRGMv2_1677_5_40
Type: pfam
Location: 24620 - 25495 (+)
Type: pfam
Location: 24620 - 25495 (+)
Gene ID: HRGMv2_1677_5_41
Type:
Location: 25602 - 26357 (+)
Type:
Location: 25602 - 26357 (+)
Gene ID: HRGMv2_1677_5_42
Type: CAZyme
Location: 26609 - 27688 (+)
Type: CAZyme
Location: 26609 - 27688 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Parolsenella
Species
Parolsenella sp900544655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.