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Cluster: HRGMv2_1670_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1670_3 HRGMv2_1670_3_503 575483 576247 - 3.A.1.3.9
TC HRGMv2_1670_3 HRGMv2_1670_3_504 576251 576925 - 3.A.1.3.21
TC HRGMv2_1670_3 HRGMv2_1670_3_505 576906 577550 - 3.A.1.3.16
TC HRGMv2_1670_3 HRGMv2_1670_3_506 577860 579650 + 3.A.1.106.3
CAZyme HRGMv2_1670_3 HRGMv2_1670_3_507 579784 581031 + GT28
STP HRGMv2_1670_3 HRGMv2_1670_3_508 581792 582166 + Nitro_FeMo-Co
NULL(UNKNOWN) HRGMv2_1670_3 HRGMv2_1670_3_509 582780 585920 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1670_3 HRGMv2_1670_3_510 586191 587429 + 2.A.1.2.25
Gene ID: HRGMv2_1670_3_503
Type: TC
Location: 575483 - 576247 (-)
Gene ID: HRGMv2_1670_3_504
Type: TC
Location: 576251 - 576925 (-)
Gene ID: HRGMv2_1670_3_505
Type: TC
Location: 576906 - 577550 (-)
Gene ID: HRGMv2_1670_3_506
Type: TC
Location: 577860 - 579650 (+)
Gene ID: HRGMv2_1670_3_507
Type: CAZyme
Location: 579784 - 581031 (+)
Gene ID: HRGMv2_1670_3_508
Type: STP
Location: 581792 - 582166 (+)
Gene ID: HRGMv2_1670_3_509
Type:
Location: 582780 - 585920 (+)
Gene ID: HRGMv2_1670_3_510
Type: TC
Location: 586191 - 587429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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