dbCAN Logo

Cluster: HRGMv2_1670_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1670_2 HRGMv2_1670_2_73 86208 86981 - GT26
NULL(UNKNOWN) HRGMv2_1670_2 HRGMv2_1670_2_74 86975 87145 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1670_2 HRGMv2_1670_2_75 87343 88011 - 9.B.18.1.2
pfam HRGMv2_1670_2 HRGMv2_1670_2_76 88088 88612 - KOW | NusG
pfam HRGMv2_1670_2 HRGMv2_1670_2_77 88859 89512 - CpsB_CapC
TC HRGMv2_1670_2 HRGMv2_1670_2_78 89516 90331 - 8.A.3.2.3
TC HRGMv2_1670_2 HRGMv2_1670_2_79 90344 91006 - 8.A.3.2.3
Gene ID: HRGMv2_1670_2_73
Type: CAZyme
Location: 86208 - 86981 (-)
Gene ID: HRGMv2_1670_2_74
Type:
Location: 86975 - 87145 (-)
Gene ID: HRGMv2_1670_2_75
Type: TC
Location: 87343 - 88011 (-)
Gene ID: HRGMv2_1670_2_76
Type: pfam
Location: 88088 - 88612 (-)
Gene ID: HRGMv2_1670_2_77
Type: pfam
Location: 88859 - 89512 (-)
Gene ID: HRGMv2_1670_2_78
Type: TC
Location: 89516 - 90331 (-)
Gene ID: HRGMv2_1670_2_79
Type: TC
Location: 90344 - 91006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1670_2_73 vegetarian > omnivore 4.11548 0.01479

🧭 Explore Read Mapping of CGC

← Back to Cluster List