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Cluster: HRGMv2_1669_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1669_4 HRGMv2_1669_4_112 115949 116632 - 9.B.31.1.1
peptidase HRGMv2_1669_4 HRGMv2_1669_4_113 117039 118343 + M20.UPB
NULL(UNKNOWN) HRGMv2_1669_4 HRGMv2_1669_4_114 118598 119140 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1669_4 HRGMv2_1669_4_115 119185 120705 - GH32
STP HRGMv2_1669_4 HRGMv2_1669_4_116 120840 121790 - PfkB
TC HRGMv2_1669_4 HRGMv2_1669_4_117 121894 123870 - 4.A.1.2.12
TF HRGMv2_1669_4 HRGMv2_1669_4_118 124070 125056 - LacI
CAZyme HRGMv2_1669_4 HRGMv2_1669_4_119 125132 126580 + GH32
TC HRGMv2_1669_4 HRGMv2_1669_4_120 126649 127956 + 2.A.86.1.5
Gene ID: HRGMv2_1669_4_112
Type: TC
Location: 115949 - 116632 (-)
Gene ID: HRGMv2_1669_4_113
Type: peptidase
Location: 117039 - 118343 (+)
Gene ID: HRGMv2_1669_4_114
Type:
Location: 118598 - 119140 (+)
Gene ID: HRGMv2_1669_4_115
Type: CAZyme
Location: 119185 - 120705 (-)
Gene ID: HRGMv2_1669_4_116
Type: STP
Location: 120840 - 121790 (-)
Gene ID: HRGMv2_1669_4_117
Type: TC
Location: 121894 - 123870 (-)
Gene ID: HRGMv2_1669_4_118
Type: TF
Location: 124070 - 125056 (-)
Gene ID: HRGMv2_1669_4_119
Type: CAZyme
Location: 125132 - 126580 (+)
Gene ID: HRGMv2_1669_4_120
Type: TC
Location: 126649 - 127956 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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