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Cluster: HRGMv2_1669_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1669_3 HRGMv2_1669_3_53 59125 60525 + 3.A.1.17.12
pfam HRGMv2_1669_3 HRGMv2_1669_3_54 60590 62182 + PEPCK_ATP
TC HRGMv2_1669_3 HRGMv2_1669_3_55 62431 64254 + 3.D.1.5.1
TC HRGMv2_1669_3 HRGMv2_1669_3_56 64248 66011 + 3.D.1.7.1
pfam HRGMv2_1669_3 HRGMv2_1669_3_57 66125 67102 - PTA_PTB
pfam HRGMv2_1669_3 HRGMv2_1669_3_58 67326 68525 + FAD_binding_2 | DAO | GLF | NAD_binding_8
CAZyme HRGMv2_1669_3 HRGMv2_1669_3_59 68558 69592 + GT2
CAZyme HRGMv2_1669_3 HRGMv2_1669_3_60 69642 70754 - GT8
Gene ID: HRGMv2_1669_3_53
Type: TC
Location: 59125 - 60525 (+)
Gene ID: HRGMv2_1669_3_54
Type: pfam
Location: 60590 - 62182 (+)
Gene ID: HRGMv2_1669_3_55
Type: TC
Location: 62431 - 64254 (+)
Gene ID: HRGMv2_1669_3_56
Type: TC
Location: 64248 - 66011 (+)
Gene ID: HRGMv2_1669_3_57
Type: pfam
Location: 66125 - 67102 (-)
Gene ID: HRGMv2_1669_3_58
Type: pfam
Location: 67326 - 68525 (+)
Gene ID: HRGMv2_1669_3_59
Type: CAZyme
Location: 68558 - 69592 (+)
Gene ID: HRGMv2_1669_3_60
Type: CAZyme
Location: 69642 - 70754 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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