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Cluster: HRGMv2_1669_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1669_1 HRGMv2_1669_1_426 491217 492698 + 3.A.1.31.1
TC HRGMv2_1669_1 HRGMv2_1669_1_427 492793 494493 + 3.A.1.21.1
TC HRGMv2_1669_1 HRGMv2_1669_1_428 494481 496235 + 3.A.1.21.1
pfam HRGMv2_1669_1 HRGMv2_1669_1_429 496380 497087 - Transglut_core
TC HRGMv2_1669_1 HRGMv2_1669_1_430 497414 498601 - 3.A.1.1.26
CAZyme HRGMv2_1669_1 HRGMv2_1669_1_431 498604 500091 - GH77
TC HRGMv2_1669_1 HRGMv2_1669_1_432 500095 500958 - 3.A.1.1.45
TC HRGMv2_1669_1 HRGMv2_1669_1_433 500958 501863 - 3.A.1.1.45
TC HRGMv2_1669_1 HRGMv2_1669_1_434 501952 503277 - 3.A.1.1.45
TF HRGMv2_1669_1 HRGMv2_1669_1_435 503327 504340 - LacI
CAZyme HRGMv2_1669_1 HRGMv2_1669_1_436 504608 505885 + GH13
pfam HRGMv2_1669_1 HRGMv2_1669_1_437 506078 507691 + Prismane
TC HRGMv2_1669_1 HRGMv2_1669_1_438 508243 509022 - 3.A.1.3.9
TC HRGMv2_1669_1 HRGMv2_1669_1_439 509042 509884 - 3.A.1.3.9
TC HRGMv2_1669_1 HRGMv2_1669_1_440 509881 510540 - 3.A.1.3.14
Gene ID: HRGMv2_1669_1_426
Type: TC
Location: 491217 - 492698 (+)
Gene ID: HRGMv2_1669_1_427
Type: TC
Location: 492793 - 494493 (+)
Gene ID: HRGMv2_1669_1_428
Type: TC
Location: 494481 - 496235 (+)
Gene ID: HRGMv2_1669_1_429
Type: pfam
Location: 496380 - 497087 (-)
Gene ID: HRGMv2_1669_1_430
Type: TC
Location: 497414 - 498601 (-)
Gene ID: HRGMv2_1669_1_431
Type: CAZyme
Location: 498604 - 500091 (-)
Gene ID: HRGMv2_1669_1_432
Type: TC
Location: 500095 - 500958 (-)
Gene ID: HRGMv2_1669_1_433
Type: TC
Location: 500958 - 501863 (-)
Gene ID: HRGMv2_1669_1_434
Type: TC
Location: 501952 - 503277 (-)
Gene ID: HRGMv2_1669_1_435
Type: TF
Location: 503327 - 504340 (-)
Gene ID: HRGMv2_1669_1_436
Type: CAZyme
Location: 504608 - 505885 (+)
Gene ID: HRGMv2_1669_1_437
Type: pfam
Location: 506078 - 507691 (+)
Gene ID: HRGMv2_1669_1_438
Type: TC
Location: 508243 - 509022 (-)
Gene ID: HRGMv2_1669_1_439
Type: TC
Location: 509042 - 509884 (-)
Gene ID: HRGMv2_1669_1_440
Type: TC
Location: 509881 - 510540 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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