Cluster: HRGMv2_1669_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1669
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1669_7 | HRGMv2_1669_7_54 | 63890 | 66172 | + | GT35 |
| TC | HRGMv2_1669_7 | HRGMv2_1669_7_55 | 66611 | 69292 | - | 3.A.3.2.21 |
| NULL(UNKNOWN) | HRGMv2_1669_7 | HRGMv2_1669_7_56 | 69832 | 69981 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1669_7 | HRGMv2_1669_7_57 | 69981 | 70736 | + | Oxidored_FMN |
| TC | HRGMv2_1669_7 | HRGMv2_1669_7_58 | 70733 | 74500 | - | 3.A.1.21.1 |
| pfam | HRGMv2_1669_7 | HRGMv2_1669_7_59 | 74515 | 75120 | - | Trep_Strep |
| TC | HRGMv2_1669_7 | HRGMv2_1669_7_60 | 75181 | 76599 | - | 3.A.1.31.1 |
Gene ID: HRGMv2_1669_7_54
Type: CAZyme
Location: 63890 - 66172 (+)
Type: CAZyme
Location: 63890 - 66172 (+)
Gene ID: HRGMv2_1669_7_55
Type: TC
Location: 66611 - 69292 (-)
Type: TC
Location: 66611 - 69292 (-)
Gene ID: HRGMv2_1669_7_56
Type:
Location: 69832 - 69981 (+)
Type:
Location: 69832 - 69981 (+)
Gene ID: HRGMv2_1669_7_57
Type: pfam
Location: 69981 - 70736 (+)
Type: pfam
Location: 69981 - 70736 (+)
Gene ID: HRGMv2_1669_7_58
Type: TC
Location: 70733 - 74500 (-)
Type: TC
Location: 70733 - 74500 (-)
Gene ID: HRGMv2_1669_7_59
Type: pfam
Location: 74515 - 75120 (-)
Type: pfam
Location: 74515 - 75120 (-)
Gene ID: HRGMv2_1669_7_60
Type: TC
Location: 75181 - 76599 (-)
Type: TC
Location: 75181 - 76599 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella
Species
Olsenella uli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.