Cluster: HRGMv2_1669_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1669
- CGC Family ID: CGCFAM_00309
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1669_6 | HRGMv2_1669_6_44 | 59339 | 60409 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_1669_6 | HRGMv2_1669_6_45 | 60611 | 61375 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1669_6 | HRGMv2_1669_6_46 | 61571 | 62425 | - | PseudoU_synth_1 |
| TC | HRGMv2_1669_6 | HRGMv2_1669_6_47 | 62448 | 63272 | - | 3.A.1.28.2 |
| TC | HRGMv2_1669_6 | HRGMv2_1669_6_48 | 63262 | 64920 | - | 3.A.1.26.5 |
Gene ID: HRGMv2_1669_6_44
Type: CAZyme
Location: 59339 - 60409 (-)
Type: CAZyme
Location: 59339 - 60409 (-)
Gene ID: HRGMv2_1669_6_45
Type:
Location: 60611 - 61375 (-)
Type:
Location: 60611 - 61375 (-)
Gene ID: HRGMv2_1669_6_46
Type: pfam
Location: 61571 - 62425 (-)
Type: pfam
Location: 61571 - 62425 (-)
Gene ID: HRGMv2_1669_6_47
Type: TC
Location: 62448 - 63272 (-)
Type: TC
Location: 62448 - 63272 (-)
Gene ID: HRGMv2_1669_6_48
Type: TC
Location: 63262 - 64920 (-)
Type: TC
Location: 63262 - 64920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella
Species
Olsenella uli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.