Cluster: HRGMv2_1664_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1664
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1664_8 | HRGMv2_1664_8_33 | 41064 | 41939 | + | 3.A.1.148.4 |
| NULL(UNKNOWN) | HRGMv2_1664_8 | HRGMv2_1664_8_34 | 41944 | 43182 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1664_8 | HRGMv2_1664_8_35 | 43205 | 44641 | - | CE4 |
| TC | HRGMv2_1664_8 | HRGMv2_1664_8_36 | 45232 | 46647 | + | 2.A.25.1.3 |
| pfam | HRGMv2_1664_8 | HRGMv2_1664_8_37 | 46651 | 47115 | - | DUF1648 |
| TC | HRGMv2_1664_8 | HRGMv2_1664_8_38 | 47247 | 48653 | - | 2.A.22.5.3 |
| TC | HRGMv2_1664_8 | HRGMv2_1664_8_39 | 48874 | 50286 | - | 2.A.22.5.3 |
Gene ID: HRGMv2_1664_8_33
Type: TC
Location: 41064 - 41939 (+)
Type: TC
Location: 41064 - 41939 (+)
Gene ID: HRGMv2_1664_8_34
Type:
Location: 41944 - 43182 (+)
Type:
Location: 41944 - 43182 (+)
Gene ID: HRGMv2_1664_8_35
Type: CAZyme
Location: 43205 - 44641 (-)
Type: CAZyme
Location: 43205 - 44641 (-)
Gene ID: HRGMv2_1664_8_36
Type: TC
Location: 45232 - 46647 (+)
Type: TC
Location: 45232 - 46647 (+)
Gene ID: HRGMv2_1664_8_37
Type: pfam
Location: 46651 - 47115 (-)
Type: pfam
Location: 46651 - 47115 (-)
Gene ID: HRGMv2_1664_8_38
Type: TC
Location: 47247 - 48653 (-)
Type: TC
Location: 47247 - 48653 (-)
Gene ID: HRGMv2_1664_8_39
Type: TC
Location: 48874 - 50286 (-)
Type: TC
Location: 48874 - 50286 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia exigua
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.