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Cluster: HRGMv2_1663_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1663_6 HRGMv2_1663_6_11 14652 15752 - 3.A.1.34.1
pfam HRGMv2_1663_6 HRGMv2_1663_6_12 17341 17799 + DUF386
TC HRGMv2_1663_6 HRGMv2_1663_6_13 18418 20013 + 3.A.1.5.27
TC HRGMv2_1663_6 HRGMv2_1663_6_14 20142 21098 + 3.A.1.5.38
TC HRGMv2_1663_6 HRGMv2_1663_6_15 21101 23155 + 3.A.1.5.25
TC HRGMv2_1663_6 HRGMv2_1663_6_16 23156 23977 + 3.A.1.5.35
CAZyme HRGMv2_1663_6 HRGMv2_1663_6_17 24113 25087 + CE7
CAZyme HRGMv2_1663_6 HRGMv2_1663_6_18 25089 26138 + CE7
Gene ID: HRGMv2_1663_6_11
Type: TC
Location: 14652 - 15752 (-)
Gene ID: HRGMv2_1663_6_12
Type: pfam
Location: 17341 - 17799 (+)
Gene ID: HRGMv2_1663_6_13
Type: TC
Location: 18418 - 20013 (+)
Gene ID: HRGMv2_1663_6_14
Type: TC
Location: 20142 - 21098 (+)
Gene ID: HRGMv2_1663_6_15
Type: TC
Location: 21101 - 23155 (+)
Gene ID: HRGMv2_1663_6_16
Type: TC
Location: 23156 - 23977 (+)
Gene ID: HRGMv2_1663_6_17
Type: CAZyme
Location: 24113 - 25087 (+)
Gene ID: HRGMv2_1663_6_18
Type: CAZyme
Location: 25089 - 26138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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