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Cluster: HRGMv2_1663_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1663_1 HRGMv2_1663_1_270 328430 329335 + 3.A.5.2.2
TC HRGMv2_1663_1 HRGMv2_1663_1_271 329342 330721 + 9.B.76.1.1
peptidase HRGMv2_1663_1 HRGMv2_1663_1_272 331006 332691 - C82.001
pfam HRGMv2_1663_1 HRGMv2_1663_1_273 332784 333626 + SpoU_methylase
TC HRGMv2_1663_1 HRGMv2_1663_1_274 333711 335594 + 3.A.16.1.2
pfam HRGMv2_1663_1 HRGMv2_1663_1_275 336079 338892 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g
TC HRGMv2_1663_1 HRGMv2_1663_1_276 338900 339415 + 9.B.105.1.1
pfam HRGMv2_1663_1 HRGMv2_1663_1_277 339507 340526 + PseudoU_synth_2 | S4
CAZyme HRGMv2_1663_1 HRGMv2_1663_1_278 340556 341854 + GT2
Gene ID: HRGMv2_1663_1_270
Type: TC
Location: 328430 - 329335 (+)
Gene ID: HRGMv2_1663_1_271
Type: TC
Location: 329342 - 330721 (+)
Gene ID: HRGMv2_1663_1_272
Type: peptidase
Location: 331006 - 332691 (-)
Gene ID: HRGMv2_1663_1_273
Type: pfam
Location: 332784 - 333626 (+)
Gene ID: HRGMv2_1663_1_274
Type: TC
Location: 333711 - 335594 (+)
Gene ID: HRGMv2_1663_1_275
Type: pfam
Location: 336079 - 338892 (+)
Gene ID: HRGMv2_1663_1_276
Type: TC
Location: 338900 - 339415 (+)
Gene ID: HRGMv2_1663_1_277
Type: pfam
Location: 339507 - 340526 (+)
Gene ID: HRGMv2_1663_1_278
Type: CAZyme
Location: 340556 - 341854 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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