Cluster: HRGMv2_1663_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1663
- CGC Family ID: CGCFAM_04191
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1663_1 | HRGMv2_1663_1_110 | 143968 | 145977 | + | GH36 |
| pfam | HRGMv2_1663_1 | HRGMv2_1663_1_111 | 145970 | 147190 | + | GHMP_kinases_N | GalKase_gal_bdg |
| pfam | HRGMv2_1663_1 | HRGMv2_1663_1_112 | 147175 | 148752 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_113 | 148779 | 149459 | - | 3.D.1.8.1 |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_114 | 149757 | 151736 | - | 3.A.1.135.5 |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_115 | 151729 | 153549 | - | 3.A.1.135.5 |
| TF | HRGMv2_1663_1 | HRGMv2_1663_1_116 | 153525 | 154025 | - | MarR |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_117 | 154375 | 155325 | + | 3.A.1.7.5 |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_118 | 155373 | 156308 | + | 3.A.1.7.5 |
| pfam | HRGMv2_1663_1 | HRGMv2_1663_1_119 | 156301 | 157281 | + | BPD_transp_1 |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_120 | 157278 | 158069 | + | 3.A.1.7.5 |
| TC | HRGMv2_1663_1 | HRGMv2_1663_1_121 | 158069 | 158821 | + | 3.A.1.7.5 |
Gene ID: HRGMv2_1663_1_110
Type: CAZyme
Location: 143968 - 145977 (+)
Type: CAZyme
Location: 143968 - 145977 (+)
Gene ID: HRGMv2_1663_1_111
Type: pfam
Location: 145970 - 147190 (+)
Type: pfam
Location: 145970 - 147190 (+)
Gene ID: HRGMv2_1663_1_112
Type: pfam
Location: 147175 - 148752 (+)
Type: pfam
Location: 147175 - 148752 (+)
Gene ID: HRGMv2_1663_1_113
Type: TC
Location: 148779 - 149459 (-)
Type: TC
Location: 148779 - 149459 (-)
Gene ID: HRGMv2_1663_1_114
Type: TC
Location: 149757 - 151736 (-)
Type: TC
Location: 149757 - 151736 (-)
Gene ID: HRGMv2_1663_1_115
Type: TC
Location: 151729 - 153549 (-)
Type: TC
Location: 151729 - 153549 (-)
Gene ID: HRGMv2_1663_1_116
Type: TF
Location: 153525 - 154025 (-)
Type: TF
Location: 153525 - 154025 (-)
Gene ID: HRGMv2_1663_1_117
Type: TC
Location: 154375 - 155325 (+)
Type: TC
Location: 154375 - 155325 (+)
Gene ID: HRGMv2_1663_1_118
Type: TC
Location: 155373 - 156308 (+)
Type: TC
Location: 155373 - 156308 (+)
Gene ID: HRGMv2_1663_1_119
Type: pfam
Location: 156301 - 157281 (+)
Type: pfam
Location: 156301 - 157281 (+)
Gene ID: HRGMv2_1663_1_120
Type: TC
Location: 157278 - 158069 (+)
Type: TC
Location: 157278 - 158069 (+)
Gene ID: HRGMv2_1663_1_121
Type: TC
Location: 158069 - 158821 (+)
Type: TC
Location: 158069 - 158821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Parafannyhessea
Species
Parafannyhessea sp900538935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.