dbCAN Logo

Cluster: HRGMv2_1663_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1663_17 HRGMv2_1663_17_10 9048 11915 + 3.A.3.1.8
TC HRGMv2_1663_17 HRGMv2_1663_17_11 11922 12575 + 3.A.3.1.8
TC HRGMv2_1663_17 HRGMv2_1663_17_12 12585 13244 + 3.A.3.1.8
pfam HRGMv2_1663_17 HRGMv2_1663_17_13 13434 14294 + S6PP | Hydrolase_3
NULL(UNKNOWN) HRGMv2_1663_17 HRGMv2_1663_17_14 14621 14809 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1663_17 HRGMv2_1663_17_15 14973 15767 - 3.A.1.34.1
TC HRGMv2_1663_17 HRGMv2_1663_17_16 15767 16684 - 3.A.1.34.1
TC HRGMv2_1663_17 HRGMv2_1663_17_17 16803 17765 - 3.A.1.34.1
CAZyme HRGMv2_1663_17 HRGMv2_1663_17_18 18046 19740 - GH13_29
TC HRGMv2_1663_17 HRGMv2_1663_17_19 19912 21924 - 4.A.1.2.13
Gene ID: HRGMv2_1663_17_10
Type: TC
Location: 9048 - 11915 (+)
Gene ID: HRGMv2_1663_17_11
Type: TC
Location: 11922 - 12575 (+)
Gene ID: HRGMv2_1663_17_12
Type: TC
Location: 12585 - 13244 (+)
Gene ID: HRGMv2_1663_17_13
Type: pfam
Location: 13434 - 14294 (+)
Gene ID: HRGMv2_1663_17_14
Type:
Location: 14621 - 14809 (+)
Gene ID: HRGMv2_1663_17_15
Type: TC
Location: 14973 - 15767 (-)
Gene ID: HRGMv2_1663_17_16
Type: TC
Location: 15767 - 16684 (-)
Gene ID: HRGMv2_1663_17_17
Type: TC
Location: 16803 - 17765 (-)
Gene ID: HRGMv2_1663_17_18
Type: CAZyme
Location: 18046 - 19740 (-)
Gene ID: HRGMv2_1663_17_19
Type: TC
Location: 19912 - 21924 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List