Cluster: HRGMv2_1663_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_1663
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1663_9 | HRGMv2_1663_9_5 | 3112 | 4311 | - | 3.A.1.1.26 |
| CAZyme | HRGMv2_1663_9 | HRGMv2_1663_9_6 | 4311 | 5801 | - | GH77 |
| TC | HRGMv2_1663_9 | HRGMv2_1663_9_7 | 5807 | 6670 | - | 3.A.1.1.45 |
| TC | HRGMv2_1663_9 | HRGMv2_1663_9_8 | 6670 | 7584 | - | 3.A.1.1.45 |
| TC | HRGMv2_1663_9 | HRGMv2_1663_9_9 | 7663 | 9018 | - | 3.A.1.1.45 |
| TF | HRGMv2_1663_9 | HRGMv2_1663_9_10 | 9068 | 10084 | - | LacI |
| CAZyme | HRGMv2_1663_9 | HRGMv2_1663_9_11 | 10442 | 11779 | + | GH13 |
Gene ID: HRGMv2_1663_9_5
Type: TC
Location: 3112 - 4311 (-)
Type: TC
Location: 3112 - 4311 (-)
Gene ID: HRGMv2_1663_9_6
Type: CAZyme
Location: 4311 - 5801 (-)
Type: CAZyme
Location: 4311 - 5801 (-)
Gene ID: HRGMv2_1663_9_7
Type: TC
Location: 5807 - 6670 (-)
Type: TC
Location: 5807 - 6670 (-)
Gene ID: HRGMv2_1663_9_8
Type: TC
Location: 6670 - 7584 (-)
Type: TC
Location: 6670 - 7584 (-)
Gene ID: HRGMv2_1663_9_9
Type: TC
Location: 7663 - 9018 (-)
Type: TC
Location: 7663 - 9018 (-)
Gene ID: HRGMv2_1663_9_10
Type: TF
Location: 9068 - 10084 (-)
Type: TF
Location: 9068 - 10084 (-)
Gene ID: HRGMv2_1663_9_11
Type: CAZyme
Location: 10442 - 11779 (+)
Type: CAZyme
Location: 10442 - 11779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Parafannyhessea
Species
Parafannyhessea sp900538935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.