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Cluster: HRGMv2_1663_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1663_7 HRGMv2_1663_7_51 70304 71467 + CE9
pfam HRGMv2_1663_7 HRGMv2_1663_7_52 72009 73088 + OTCace | OTCace_N
TC HRGMv2_1663_7 HRGMv2_1663_7_53 73209 74639 + 2.A.3.7.7
pfam HRGMv2_1663_7 HRGMv2_1663_7_54 74780 75994 + PAD_porph | PAD_porph
TC HRGMv2_1663_7 HRGMv2_1663_7_55 76113 77600 + 2.A.3.7.7
pfam HRGMv2_1663_7 HRGMv2_1663_7_56 77717 78940 + Glyco_tranf_2_3
TC HRGMv2_1663_7 HRGMv2_1663_7_57 78937 80289 + 9.B.33.1.1
TF HRGMv2_1663_7 HRGMv2_1663_7_58 80349 81086 + LytTR
pfam HRGMv2_1663_7 HRGMv2_1663_7_59 81194 81667 + Metallophos | Metallophos_2
TC HRGMv2_1663_7 HRGMv2_1663_7_60 81748 82458 - 9.B.105.2.2
Gene ID: HRGMv2_1663_7_51
Type: CAZyme
Location: 70304 - 71467 (+)
Gene ID: HRGMv2_1663_7_52
Type: pfam
Location: 72009 - 73088 (+)
Gene ID: HRGMv2_1663_7_53
Type: TC
Location: 73209 - 74639 (+)
Gene ID: HRGMv2_1663_7_54
Type: pfam
Location: 74780 - 75994 (+)
Gene ID: HRGMv2_1663_7_55
Type: TC
Location: 76113 - 77600 (+)
Gene ID: HRGMv2_1663_7_56
Type: pfam
Location: 77717 - 78940 (+)
Gene ID: HRGMv2_1663_7_57
Type: TC
Location: 78937 - 80289 (+)
Gene ID: HRGMv2_1663_7_58
Type: TF
Location: 80349 - 81086 (+)
Gene ID: HRGMv2_1663_7_59
Type: pfam
Location: 81194 - 81667 (+)
Gene ID: HRGMv2_1663_7_60
Type: TC
Location: 81748 - 82458 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1663_7_52 vegan > omnivore 1.18147 0.01287
HRGMv2_1663_7_54 vegan > omnivore 1.63668 0.01287

🧭 Explore Read Mapping of CGC

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