dbCAN Logo

Cluster: HRGMv2_1663_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1663_1 HRGMv2_1663_1_9 13653 14771 + GT2
pfam HRGMv2_1663_1 HRGMv2_1663_1_10 14842 16431 + MBOAT
NULL(UNKNOWN) HRGMv2_1663_1 HRGMv2_1663_1_11 16418 17920 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1663_1 HRGMv2_1663_1_12 17917 19437 + 2.A.1.42.2
NULL(UNKNOWN) HRGMv2_1663_1 HRGMv2_1663_1_13 19536 19790 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1663_1 HRGMv2_1663_1_14 19861 21909 + DUF6541
CAZyme HRGMv2_1663_1 HRGMv2_1663_1_15 22011 23165 + GT2
CAZyme HRGMv2_1663_1 HRGMv2_1663_1_16 23168 24217 + GT2
Gene ID: HRGMv2_1663_1_9
Type: CAZyme
Location: 13653 - 14771 (+)
Gene ID: HRGMv2_1663_1_10
Type: pfam
Location: 14842 - 16431 (+)
Gene ID: HRGMv2_1663_1_11
Type:
Location: 16418 - 17920 (+)
Gene ID: HRGMv2_1663_1_12
Type: TC
Location: 17917 - 19437 (+)
Gene ID: HRGMv2_1663_1_13
Type:
Location: 19536 - 19790 (+)
Gene ID: HRGMv2_1663_1_14
Type: pfam
Location: 19861 - 21909 (+)
Gene ID: HRGMv2_1663_1_15
Type: CAZyme
Location: 22011 - 23165 (+)
Gene ID: HRGMv2_1663_1_16
Type: CAZyme
Location: 23168 - 24217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List