Cluster: HRGMv2_1662_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1662
- CGC Family ID: CGCFAM_01125
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1662_1 | HRGMv2_1662_1_1443 | 1757112 | 1758203 | - | GT4 |
| pfam | HRGMv2_1662_1 | HRGMv2_1662_1_1444 | 1758207 | 1759448 | - | Wzy_C |
| CAZyme | HRGMv2_1662_1 | HRGMv2_1662_1_1445 | 1759450 | 1760724 | - | GT4 |
| TC | HRGMv2_1662_1 | HRGMv2_1662_1_1446 | 1760721 | 1761566 | - | 9.B.18.1.3 |
| pfam | HRGMv2_1662_1 | HRGMv2_1662_1_1447 | 1761607 | 1762119 | - | KOW | NusG |
| pfam | HRGMv2_1662_1 | HRGMv2_1662_1_1448 | 1762623 | 1763276 | - | CpsB_CapC |
| TC | HRGMv2_1662_1 | HRGMv2_1662_1_1449 | 1763280 | 1764260 | - | 8.A.3.1.2 |
| TC | HRGMv2_1662_1 | HRGMv2_1662_1_1450 | 1764274 | 1764933 | - | 8.A.3.2.3 |
| pfam | HRGMv2_1662_1 | HRGMv2_1662_1_1451 | 1765023 | 1766270 | - | LytR_cpsA_psr |
| NULL(UNKNOWN) | HRGMv2_1662_1 | HRGMv2_1662_1_1452 | 1766567 | 1766887 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1662_1 | HRGMv2_1662_1_1453 | 1766888 | 1769959 | - | 2.A.6.4.3 |
Gene ID: HRGMv2_1662_1_1443
Type: CAZyme
Location: 1757112 - 1758203 (-)
Type: CAZyme
Location: 1757112 - 1758203 (-)
Gene ID: HRGMv2_1662_1_1444
Type: pfam
Location: 1758207 - 1759448 (-)
Type: pfam
Location: 1758207 - 1759448 (-)
Gene ID: HRGMv2_1662_1_1445
Type: CAZyme
Location: 1759450 - 1760724 (-)
Type: CAZyme
Location: 1759450 - 1760724 (-)
Gene ID: HRGMv2_1662_1_1446
Type: TC
Location: 1760721 - 1761566 (-)
Type: TC
Location: 1760721 - 1761566 (-)
Gene ID: HRGMv2_1662_1_1447
Type: pfam
Location: 1761607 - 1762119 (-)
Type: pfam
Location: 1761607 - 1762119 (-)
Gene ID: HRGMv2_1662_1_1448
Type: pfam
Location: 1762623 - 1763276 (-)
Type: pfam
Location: 1762623 - 1763276 (-)
Gene ID: HRGMv2_1662_1_1449
Type: TC
Location: 1763280 - 1764260 (-)
Type: TC
Location: 1763280 - 1764260 (-)
Gene ID: HRGMv2_1662_1_1450
Type: TC
Location: 1764274 - 1764933 (-)
Type: TC
Location: 1764274 - 1764933 (-)
Gene ID: HRGMv2_1662_1_1451
Type: pfam
Location: 1765023 - 1766270 (-)
Type: pfam
Location: 1765023 - 1766270 (-)
Gene ID: HRGMv2_1662_1_1452
Type:
Location: 1766567 - 1766887 (-)
Type:
Location: 1766567 - 1766887 (-)
Gene ID: HRGMv2_1662_1_1453
Type: TC
Location: 1766888 - 1769959 (-)
Type: TC
Location: 1766888 - 1769959 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900556585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.