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Cluster: HRGMv2_1662_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1662_1 HRGMv2_1662_1_64 79389 80336 + GT2
CAZyme HRGMv2_1662_1 HRGMv2_1662_1_65 80337 82205 - GT2
pfam HRGMv2_1662_1 HRGMv2_1662_1_66 82318 85149 - YfhO
TC HRGMv2_1662_1 HRGMv2_1662_1_67 85359 86138 + 3.A.1.103.6
TC HRGMv2_1662_1 HRGMv2_1662_1_68 86148 87959 + 3.A.1.103.5
pfam HRGMv2_1662_1 HRGMv2_1662_1_69 87983 89083 - LicD
pfam HRGMv2_1662_1 HRGMv2_1662_1_70 89109 91085 - DUF6541
CAZyme HRGMv2_1662_1 HRGMv2_1662_1_71 91117 93876 - GT2 | GT2
Gene ID: HRGMv2_1662_1_64
Type: CAZyme
Location: 79389 - 80336 (+)
Gene ID: HRGMv2_1662_1_65
Type: CAZyme
Location: 80337 - 82205 (-)
Gene ID: HRGMv2_1662_1_66
Type: pfam
Location: 82318 - 85149 (-)
Gene ID: HRGMv2_1662_1_67
Type: TC
Location: 85359 - 86138 (+)
Gene ID: HRGMv2_1662_1_68
Type: TC
Location: 86148 - 87959 (+)
Gene ID: HRGMv2_1662_1_69
Type: pfam
Location: 87983 - 89083 (-)
Gene ID: HRGMv2_1662_1_70
Type: pfam
Location: 89109 - 91085 (-)
Gene ID: HRGMv2_1662_1_71
Type: CAZyme
Location: 91117 - 93876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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