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Cluster: HRGMv2_1654_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1654_2 HRGMv2_1654_2_213 253736 254680 + 3.A.1.5.3
TC HRGMv2_1654_2 HRGMv2_1654_2_214 254677 255687 + 3.A.1.5.38
TC HRGMv2_1654_2 HRGMv2_1654_2_215 255754 257349 + 3.A.1.5.20
TC HRGMv2_1654_2 HRGMv2_1654_2_216 257456 258292 + 3.A.1.5.10
TC HRGMv2_1654_2 HRGMv2_1654_2_217 258289 259248 + 3.A.1.5.39
STP HRGMv2_1654_2 HRGMv2_1654_2_218 259529 260899 - HD
STP HRGMv2_1654_2 HRGMv2_1654_2_219 261314 262057 + Pribosyltran
CAZyme HRGMv2_1654_2 HRGMv2_1654_2_220 262209 263537 - GT2
Gene ID: HRGMv2_1654_2_213
Type: TC
Location: 253736 - 254680 (+)
Gene ID: HRGMv2_1654_2_214
Type: TC
Location: 254677 - 255687 (+)
Gene ID: HRGMv2_1654_2_215
Type: TC
Location: 255754 - 257349 (+)
Gene ID: HRGMv2_1654_2_216
Type: TC
Location: 257456 - 258292 (+)
Gene ID: HRGMv2_1654_2_217
Type: TC
Location: 258289 - 259248 (+)
Gene ID: HRGMv2_1654_2_218
Type: STP
Location: 259529 - 260899 (-)
Gene ID: HRGMv2_1654_2_219
Type: STP
Location: 261314 - 262057 (+)
Gene ID: HRGMv2_1654_2_220
Type: CAZyme
Location: 262209 - 263537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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