Cluster: HRGMv2_1654_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1654
- CGC Family ID: CGCFAM_00005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1654_13 | HRGMv2_1654_13_27 | 25514 | 26383 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_1654_13 | HRGMv2_1654_13_28 | 27159 | 28277 | + | GT4 |
| pfam | HRGMv2_1654_13 | HRGMv2_1654_13_29 | 28274 | 29029 | + | CDP-OH_P_transf |
| NULL(UNKNOWN) | HRGMv2_1654_13 | HRGMv2_1654_13_30 | 29039 | 29341 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1654_13 | HRGMv2_1654_13_31 | 29351 | 30532 | + | GT4 |
| CAZyme | HRGMv2_1654_13 | HRGMv2_1654_13_32 | 30535 | 31581 | + | GT2 |
Gene ID: HRGMv2_1654_13_27
Type: TC
Location: 25514 - 26383 (+)
Type: TC
Location: 25514 - 26383 (+)
Gene ID: HRGMv2_1654_13_28
Type: CAZyme
Location: 27159 - 28277 (+)
Type: CAZyme
Location: 27159 - 28277 (+)
Gene ID: HRGMv2_1654_13_29
Type: pfam
Location: 28274 - 29029 (+)
Type: pfam
Location: 28274 - 29029 (+)
Gene ID: HRGMv2_1654_13_30
Type:
Location: 29039 - 29341 (+)
Type:
Location: 29039 - 29341 (+)
Gene ID: HRGMv2_1654_13_31
Type: CAZyme
Location: 29351 - 30532 (+)
Type: CAZyme
Location: 29351 - 30532 (+)
Gene ID: HRGMv2_1654_13_32
Type: CAZyme
Location: 30535 - 31581 (+)
Type: CAZyme
Location: 30535 - 31581 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Species
UMGS1519 sp900552585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.