Cluster: HRGMv2_1654_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1654
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1654_1 | HRGMv2_1654_1_30 | 37828 | 39246 | + | AA4 |
| NULL(UNKNOWN) | HRGMv2_1654_1 | HRGMv2_1654_1_31 | 39368 | 39814 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1654_1 | HRGMv2_1654_1_32 | 39938 | 40747 | - | 1.A.1.24.5 |
| STP | HRGMv2_1654_1 | HRGMv2_1654_1_33 | 41184 | 41756 | + | Nitroreductase |
| TC | HRGMv2_1654_1 | HRGMv2_1654_1_34 | 41877 | 43265 | - | 2.A.115.2.14 |
| TC | HRGMv2_1654_1 | HRGMv2_1654_1_35 | 43780 | 45162 | + | 2.A.66.1.25 |
Gene ID: HRGMv2_1654_1_30
Type: CAZyme
Location: 37828 - 39246 (+)
Type: CAZyme
Location: 37828 - 39246 (+)
Gene ID: HRGMv2_1654_1_31
Type:
Location: 39368 - 39814 (-)
Type:
Location: 39368 - 39814 (-)
Gene ID: HRGMv2_1654_1_32
Type: TC
Location: 39938 - 40747 (-)
Type: TC
Location: 39938 - 40747 (-)
Gene ID: HRGMv2_1654_1_33
Type: STP
Location: 41184 - 41756 (+)
Type: STP
Location: 41184 - 41756 (+)
Gene ID: HRGMv2_1654_1_34
Type: TC
Location: 41877 - 43265 (-)
Type: TC
Location: 41877 - 43265 (-)
Gene ID: HRGMv2_1654_1_35
Type: TC
Location: 43780 - 45162 (+)
Type: TC
Location: 43780 - 45162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
UMGS1519
Species
UMGS1519 sp900552585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.