Cluster: HRGMv2_1652_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1652
- CGC Family ID: CGCFAM_09829
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1652_54 | HRGMv2_1652_54_3 | 3125 | 4642 | + | CE4 |
| STP | HRGMv2_1652_54 | HRGMv2_1652_54_4 | 4718 | 5377 | + | HhH-GPD |
| sulfatase | HRGMv2_1652_54 | HRGMv2_1652_54_5 | 5524 | 8265 | + | S1_2 |
| TC | HRGMv2_1652_54 | HRGMv2_1652_54_6 | 8398 | 9657 | - | 2.A.55.2.6 |
Gene ID: HRGMv2_1652_54_3
Type: CAZyme
Location: 3125 - 4642 (+)
Type: CAZyme
Location: 3125 - 4642 (+)
Gene ID: HRGMv2_1652_54_4
Type: STP
Location: 4718 - 5377 (+)
Type: STP
Location: 4718 - 5377 (+)
Gene ID: HRGMv2_1652_54_5
Type: sulfatase
Location: 5524 - 8265 (+)
Type: sulfatase
Location: 5524 - 8265 (+)
Gene ID: HRGMv2_1652_54_6
Type: TC
Location: 8398 - 9657 (-)
Type: TC
Location: 8398 - 9657 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Parolsenella
Species
Parolsenella massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.