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Cluster: HRGMv2_1649_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1649_4 HRGMv2_1649_4_18 18567 19403 + 9.B.18.1.2
CAZyme HRGMv2_1649_4 HRGMv2_1649_4_19 19413 20609 + GT4
CAZyme HRGMv2_1649_4 HRGMv2_1649_4_20 20783 21892 + GT4
pfam HRGMv2_1649_4 HRGMv2_1649_4_21 21892 23283 + O-ag_pol_Wzy
pfam HRGMv2_1649_4 HRGMv2_1649_4_22 23280 24521 + PS_pyruv_trans
CAZyme HRGMv2_1649_4 HRGMv2_1649_4_23 24514 25617 + GT4
Gene ID: HRGMv2_1649_4_18
Type: TC
Location: 18567 - 19403 (+)
Gene ID: HRGMv2_1649_4_19
Type: CAZyme
Location: 19413 - 20609 (+)
Gene ID: HRGMv2_1649_4_20
Type: CAZyme
Location: 20783 - 21892 (+)
Gene ID: HRGMv2_1649_4_21
Type: pfam
Location: 21892 - 23283 (+)
Gene ID: HRGMv2_1649_4_22
Type: pfam
Location: 23280 - 24521 (+)
Gene ID: HRGMv2_1649_4_23
Type: CAZyme
Location: 24514 - 25617 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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