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Cluster: HRGMv2_1649_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1649_3 HRGMv2_1649_3_166 185927 187219 + 2.A.1.8.9
TC HRGMv2_1649_3 HRGMv2_1649_3_167 187316 191104 + 5.A.3.1.1
TC HRGMv2_1649_3 HRGMv2_1649_3_168 191133 192731 + 5.A.3.1.1
TC HRGMv2_1649_3 HRGMv2_1649_3_169 192728 193489 + 5.A.3.1.1
TC HRGMv2_1649_3 HRGMv2_1649_3_170 193563 196757 + 5.A.3.2.1
TC HRGMv2_1649_3 HRGMv2_1649_3_171 196760 197689 + 5.A.3.3.2
NULL(UNKNOWN) HRGMv2_1649_3 HRGMv2_1649_3_172 197704 198606 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1649_3 HRGMv2_1649_3_173 198680 199357 - 3.A.1.24.5
TC HRGMv2_1649_3 HRGMv2_1649_3_174 199360 200103 - 3.A.1.24.1
CAZyme HRGMv2_1649_3 HRGMv2_1649_3_175 200387 202903 - GT2
CAZyme HRGMv2_1649_3 HRGMv2_1649_3_176 202940 205450 - GT2
Gene ID: HRGMv2_1649_3_166
Type: TC
Location: 185927 - 187219 (+)
Gene ID: HRGMv2_1649_3_167
Type: TC
Location: 187316 - 191104 (+)
Gene ID: HRGMv2_1649_3_168
Type: TC
Location: 191133 - 192731 (+)
Gene ID: HRGMv2_1649_3_169
Type: TC
Location: 192728 - 193489 (+)
Gene ID: HRGMv2_1649_3_170
Type: TC
Location: 193563 - 196757 (+)
Gene ID: HRGMv2_1649_3_171
Type: TC
Location: 196760 - 197689 (+)
Gene ID: HRGMv2_1649_3_172
Type:
Location: 197704 - 198606 (+)
Gene ID: HRGMv2_1649_3_173
Type: TC
Location: 198680 - 199357 (-)
Gene ID: HRGMv2_1649_3_174
Type: TC
Location: 199360 - 200103 (-)
Gene ID: HRGMv2_1649_3_175
Type: CAZyme
Location: 200387 - 202903 (-)
Gene ID: HRGMv2_1649_3_176
Type: CAZyme
Location: 202940 - 205450 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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