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Cluster: HRGMv2_1640_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1640_8 HRGMv2_1640_8_9 6007 8058 + 9.B.18.2.1
STP HRGMv2_1640_8 HRGMv2_1640_8_10 8157 9404 + Aminotran_1_2
TC HRGMv2_1640_8 HRGMv2_1640_8_11 9397 10119 + 9.B.18.1.2
CAZyme HRGMv2_1640_8 HRGMv2_1640_8_12 10119 10919 + GT2
pfam HRGMv2_1640_8 HRGMv2_1640_8_13 10994 11908 + ATPgrasp_TupA
CAZyme HRGMv2_1640_8 HRGMv2_1640_8_14 11915 12997 + GT4
CAZyme HRGMv2_1640_8 HRGMv2_1640_8_15 13030 14124 + GT4
pfam HRGMv2_1640_8 HRGMv2_1640_8_16 14182 15270 + EpsG
CAZyme HRGMv2_1640_8 HRGMv2_1640_8_17 15738 16958 + GT4
Gene ID: HRGMv2_1640_8_9
Type: TC
Location: 6007 - 8058 (+)
Gene ID: HRGMv2_1640_8_10
Type: STP
Location: 8157 - 9404 (+)
Gene ID: HRGMv2_1640_8_11
Type: TC
Location: 9397 - 10119 (+)
Gene ID: HRGMv2_1640_8_12
Type: CAZyme
Location: 10119 - 10919 (+)
Gene ID: HRGMv2_1640_8_13
Type: pfam
Location: 10994 - 11908 (+)
Gene ID: HRGMv2_1640_8_14
Type: CAZyme
Location: 11915 - 12997 (+)
Gene ID: HRGMv2_1640_8_15
Type: CAZyme
Location: 13030 - 14124 (+)
Gene ID: HRGMv2_1640_8_16
Type: pfam
Location: 14182 - 15270 (+)
Gene ID: HRGMv2_1640_8_17
Type: CAZyme
Location: 15738 - 16958 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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