dbCAN Logo

Cluster: HRGMv2_1640_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1640_23 HRGMv2_1640_23_36 34921 37008 - GT51
pfam HRGMv2_1640_23 HRGMv2_1640_23_37 37313 38524 + tRNA-synt_1b | S4
NULL(UNKNOWN) HRGMv2_1640_23 HRGMv2_1640_23_38 38821 42174 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1640_23 HRGMv2_1640_23_39 42116 43681 - 4.C.1.1.4
peptidase HRGMv2_1640_23 HRGMv2_1640_23_40 43702 44529 - S49.UNC
TC HRGMv2_1640_23 HRGMv2_1640_23_41 44788 47538 + 3.A.5.1.3
pfam HRGMv2_1640_23 HRGMv2_1640_23_42 47542 48669 + RF-1 | PCRF
TC HRGMv2_1640_23 HRGMv2_1640_23_43 48659 49576 + 2.A.115.1.1
pfam HRGMv2_1640_23 HRGMv2_1640_23_44 49573 50487 + Transketolase_N | E1_dh | DXP_synthase_N
pfam HRGMv2_1640_23 HRGMv2_1640_23_45 50490 51431 + Transket_pyr | Transketolase_C | Transketolase_C_1
TC HRGMv2_1640_23 HRGMv2_1640_23_46 51776 52591 + 3.A.1.140.1
Gene ID: HRGMv2_1640_23_36
Type: CAZyme
Location: 34921 - 37008 (-)
Gene ID: HRGMv2_1640_23_37
Type: pfam
Location: 37313 - 38524 (+)
Gene ID: HRGMv2_1640_23_38
Type:
Location: 38821 - 42174 (+)
Gene ID: HRGMv2_1640_23_39
Type: TC
Location: 42116 - 43681 (-)
Gene ID: HRGMv2_1640_23_40
Type: peptidase
Location: 43702 - 44529 (-)
Gene ID: HRGMv2_1640_23_41
Type: TC
Location: 44788 - 47538 (+)
Gene ID: HRGMv2_1640_23_42
Type: pfam
Location: 47542 - 48669 (+)
Gene ID: HRGMv2_1640_23_43
Type: TC
Location: 48659 - 49576 (+)
Gene ID: HRGMv2_1640_23_44
Type: pfam
Location: 49573 - 50487 (+)
Gene ID: HRGMv2_1640_23_45
Type: pfam
Location: 50490 - 51431 (+)
Gene ID: HRGMv2_1640_23_46
Type: TC
Location: 51776 - 52591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List