Cluster: HRGMv2_1638_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1638
- CGC Family ID: CGCFAM_03739
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1638_1 | HRGMv2_1638_1_198 | 242323 | 243333 | - | GT2 |
| TC | HRGMv2_1638_1 | HRGMv2_1638_1_199 | 243519 | 244709 | + | 9.B.146.1.1 |
| pfam | HRGMv2_1638_1 | HRGMv2_1638_1_200 | 244768 | 246078 | + | Polysacc_deac_1 | Bact_surface_Ig-like |
| CAZyme | HRGMv2_1638_1 | HRGMv2_1638_1_201 | 246207 | 247142 | + | GT2 |
Gene ID: HRGMv2_1638_1_198
Type: CAZyme
Location: 242323 - 243333 (-)
Type: CAZyme
Location: 242323 - 243333 (-)
Gene ID: HRGMv2_1638_1_199
Type: TC
Location: 243519 - 244709 (+)
Type: TC
Location: 243519 - 244709 (+)
Gene ID: HRGMv2_1638_1_200
Type: pfam
Location: 244768 - 246078 (+)
Type: pfam
Location: 244768 - 246078 (+)
Gene ID: HRGMv2_1638_1_201
Type: CAZyme
Location: 246207 - 247142 (+)
Type: CAZyme
Location: 246207 - 247142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Species
Slackia isoflavoniconvertens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.