dbCAN Logo

Cluster: HRGMv2_1637_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1637_1 HRGMv2_1637_1_68 80040 81887 - 3.A.1.103.1
TC HRGMv2_1637_1 HRGMv2_1637_1_69 81897 82685 - 3.A.1.103.6
CAZyme HRGMv2_1637_1 HRGMv2_1637_1_70 82957 85989 + GT111 | GT2 | GT8
CAZyme HRGMv2_1637_1 HRGMv2_1637_1_71 85993 86967 + GT2
CAZyme HRGMv2_1637_1 HRGMv2_1637_1_72 86980 88023 + GT2
CAZyme HRGMv2_1637_1 HRGMv2_1637_1_73 88038 89165 - GT2
TC HRGMv2_1637_1 HRGMv2_1637_1_74 89334 90476 + 9.B.146.1.1
pfam HRGMv2_1637_1 HRGMv2_1637_1_75 90534 91484 + LytR_cpsA_psr
TC HRGMv2_1637_1 HRGMv2_1637_1_76 91544 92371 + 3.A.1.104.1
TC HRGMv2_1637_1 HRGMv2_1637_1_77 92361 93158 + 3.A.1.103.1
Gene ID: HRGMv2_1637_1_68
Type: TC
Location: 80040 - 81887 (-)
Gene ID: HRGMv2_1637_1_69
Type: TC
Location: 81897 - 82685 (-)
Gene ID: HRGMv2_1637_1_70
Type: CAZyme
Location: 82957 - 85989 (+)
Gene ID: HRGMv2_1637_1_71
Type: CAZyme
Location: 85993 - 86967 (+)
Gene ID: HRGMv2_1637_1_72
Type: CAZyme
Location: 86980 - 88023 (+)
Gene ID: HRGMv2_1637_1_73
Type: CAZyme
Location: 88038 - 89165 (-)
Gene ID: HRGMv2_1637_1_74
Type: TC
Location: 89334 - 90476 (+)
Gene ID: HRGMv2_1637_1_75
Type: pfam
Location: 90534 - 91484 (+)
Gene ID: HRGMv2_1637_1_76
Type: TC
Location: 91544 - 92371 (+)
Gene ID: HRGMv2_1637_1_77
Type: TC
Location: 92361 - 93158 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List