Cluster: HRGMv2_1635_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1635
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1635_3 | HRGMv2_1635_3_46 | 61340 | 62107 | - | 3.A.1.25.4 |
| TC | HRGMv2_1635_3 | HRGMv2_1635_3_47 | 62104 | 62952 | - | 3.A.1.33.1 |
| TC | HRGMv2_1635_3 | HRGMv2_1635_3_48 | 62949 | 63806 | - | 3.A.1.32.3 |
| TC | HRGMv2_1635_3 | HRGMv2_1635_3_49 | 63851 | 64438 | - | 3.A.1.26.2 |
| CAZyme | HRGMv2_1635_3 | HRGMv2_1635_3_50 | 65355 | 66623 | + | CE4 |
Gene ID: HRGMv2_1635_3_46
Type: TC
Location: 61340 - 62107 (-)
Type: TC
Location: 61340 - 62107 (-)
Gene ID: HRGMv2_1635_3_47
Type: TC
Location: 62104 - 62952 (-)
Type: TC
Location: 62104 - 62952 (-)
Gene ID: HRGMv2_1635_3_48
Type: TC
Location: 62949 - 63806 (-)
Type: TC
Location: 62949 - 63806 (-)
Gene ID: HRGMv2_1635_3_49
Type: TC
Location: 63851 - 64438 (-)
Type: TC
Location: 63851 - 64438 (-)
Gene ID: HRGMv2_1635_3_50
Type: CAZyme
Location: 65355 - 66623 (+)
Type: CAZyme
Location: 65355 - 66623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Ellagibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1635_3_47 | vegan > omnivore | 1.10843 | 0.01185 |
| HRGMv2_1635_3_48 | vegetarian > omnivore | 1.01303 | 0.00021 |
| HRGMv2_1635_3_49 | vegan > omnivore | 1.49346 | 0.01185 |
| HRGMv2_1635_3_49 | vegetarian > omnivore | 2.28508 | 0.00021 |
| HRGMv2_1635_3_50 | vegetarian > omnivore | 1.53597 | 0.00021 |