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Cluster: HRGMv2_1634_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1634_20 HRGMv2_1634_20_1 3 509 + 3.A.1.3.9
NULL(UNKNOWN) HRGMv2_1634_20 HRGMv2_1634_20_2 844 1254 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1634_20 HRGMv2_1634_20_3 1326 1970 + CoaE
CAZyme HRGMv2_1634_20 HRGMv2_1634_20_4 2069 2614 + GH23
pfam HRGMv2_1634_20 HRGMv2_1634_20_5 2715 4940 + Helicase_C | UVR | ResIII | UvrB | UvrB_inter
TF HRGMv2_1634_20 HRGMv2_1634_20_6 5091 5363 + SpoVT_AbrB
TC HRGMv2_1634_20 HRGMv2_1634_20_7 5890 6174 + 4.A.5.1.6
Gene ID: HRGMv2_1634_20_1
Type: TC
Location: 3 - 509 (+)
Gene ID: HRGMv2_1634_20_2
Type:
Location: 844 - 1254 (+)
Gene ID: HRGMv2_1634_20_3
Type: pfam
Location: 1326 - 1970 (+)
Gene ID: HRGMv2_1634_20_4
Type: CAZyme
Location: 2069 - 2614 (+)
Gene ID: HRGMv2_1634_20_5
Type: pfam
Location: 2715 - 4940 (+)
Gene ID: HRGMv2_1634_20_6
Type: TF
Location: 5091 - 5363 (+)
Gene ID: HRGMv2_1634_20_7
Type: TC
Location: 5890 - 6174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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