dbCAN HGM

Cluster: HRGMv2_1632_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1632_11	HRGMv2_1632_11_249	295500	296291	+	3.A.1.11.1
pfam	HRGMv2_1632_11	HRGMv2_1632_11_250	296301	297902	+	BPD_transp_1 \| BPD_transp_1
TF	HRGMv2_1632_11	HRGMv2_1632_11_251	297924	298811	+	0040266
CAZyme	HRGMv2_1632_11	HRGMv2_1632_11_252	298821	299969	+	GT4
CAZyme	HRGMv2_1632_11	HRGMv2_1632_11_253	300138	301007	+	GT2
CAZyme	HRGMv2_1632_11	HRGMv2_1632_11_254	301034	302050	+	GT2
pfam	HRGMv2_1632_11	HRGMv2_1632_11_255	302054	302881	-	LicD
CAZyme	HRGMv2_1632_11	HRGMv2_1632_11_256	303005	303943	+	GT2

Gene ID: HRGMv2_1632_11_249
Type: TC
Location: 295500 - 296291 (+)

Gene ID: HRGMv2_1632_11_250
Type: pfam
Location: 296301 - 297902 (+)

Gene ID: HRGMv2_1632_11_251
Type: TF
Location: 297924 - 298811 (+)

Gene ID: HRGMv2_1632_11_252
Type: CAZyme
Location: 298821 - 299969 (+)

Gene ID: HRGMv2_1632_11_253
Type: CAZyme
Location: 300138 - 301007 (+)

Gene ID: HRGMv2_1632_11_254
Type: CAZyme
Location: 301034 - 302050 (+)

Gene ID: HRGMv2_1632_11_255
Type: pfam
Location: 302054 - 302881 (-)

Gene ID: HRGMv2_1632_11_256
Type: CAZyme
Location: 303005 - 303943 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.