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Cluster: HRGMv2_1632_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1632_15 HRGMv2_1632_15_80 90020 90457 + 4.A.6.1.2
pfam HRGMv2_1632_15 HRGMv2_1632_15_81 90457 90741 + YajC
TC HRGMv2_1632_15 HRGMv2_1632_15_82 90833 91315 + 4.A.6.1.4
TC HRGMv2_1632_15 HRGMv2_1632_15_83 91440 92249 + 4.A.6.1.4
TC HRGMv2_1632_15 HRGMv2_1632_15_84 92239 93339 + 4.A.6.1.4
TF HRGMv2_1632_15 HRGMv2_1632_15_85 93483 94211 + GntR
STP HRGMv2_1632_15 HRGMv2_1632_15_86 94237 95406 + SIS
CAZyme HRGMv2_1632_15 HRGMv2_1632_15_87 95491 96651 + CE9
Gene ID: HRGMv2_1632_15_80
Type: TC
Location: 90020 - 90457 (+)
Gene ID: HRGMv2_1632_15_81
Type: pfam
Location: 90457 - 90741 (+)
Gene ID: HRGMv2_1632_15_82
Type: TC
Location: 90833 - 91315 (+)
Gene ID: HRGMv2_1632_15_83
Type: TC
Location: 91440 - 92249 (+)
Gene ID: HRGMv2_1632_15_84
Type: TC
Location: 92239 - 93339 (+)
Gene ID: HRGMv2_1632_15_85
Type: TF
Location: 93483 - 94211 (+)
Gene ID: HRGMv2_1632_15_86
Type: STP
Location: 94237 - 95406 (+)
Gene ID: HRGMv2_1632_15_87
Type: CAZyme
Location: 95491 - 96651 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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