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Cluster: HRGMv2_1632_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1632_14 HRGMv2_1632_14_60 61081 62364 + GH25
CAZyme HRGMv2_1632_14 HRGMv2_1632_14_61 62451 63506 + GH73
pfam HRGMv2_1632_14 HRGMv2_1632_14_62 63554 65293 + Amidase_2 | DUF5648
CAZyme HRGMv2_1632_14 HRGMv2_1632_14_63 65371 67791 - GT2 | GT2
pfam HRGMv2_1632_14 HRGMv2_1632_14_64 68009 68911 + NTP_transferase | NTP_transf_3
CAZyme HRGMv2_1632_14 HRGMv2_1632_14_65 68904 70157 + GT2
pfam HRGMv2_1632_14 HRGMv2_1632_14_66 70392 72056 + Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
TC HRGMv2_1632_14 HRGMv2_1632_14_67 72061 74577 + 3.A.12.1.1
Gene ID: HRGMv2_1632_14_60
Type: CAZyme
Location: 61081 - 62364 (+)
Gene ID: HRGMv2_1632_14_61
Type: CAZyme
Location: 62451 - 63506 (+)
Gene ID: HRGMv2_1632_14_62
Type: pfam
Location: 63554 - 65293 (+)
Gene ID: HRGMv2_1632_14_63
Type: CAZyme
Location: 65371 - 67791 (-)
Gene ID: HRGMv2_1632_14_64
Type: pfam
Location: 68009 - 68911 (+)
Gene ID: HRGMv2_1632_14_65
Type: CAZyme
Location: 68904 - 70157 (+)
Gene ID: HRGMv2_1632_14_66
Type: pfam
Location: 70392 - 72056 (+)
Gene ID: HRGMv2_1632_14_67
Type: TC
Location: 72061 - 74577 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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