Cluster: HRGMv2_1628_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1628
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1628_40 | HRGMv2_1628_40_19 | 18319 | 19320 | - | GT2 |
| CAZyme | HRGMv2_1628_40 | HRGMv2_1628_40_20 | 19506 | 20960 | + | GT28 |
| TC | HRGMv2_1628_40 | HRGMv2_1628_40_21 | 21008 | 22522 | + | 1.I.1.1.3 |
Gene ID: HRGMv2_1628_40_19
Type: CAZyme
Location: 18319 - 19320 (-)
Type: CAZyme
Location: 18319 - 19320 (-)
Gene ID: HRGMv2_1628_40_20
Type: CAZyme
Location: 19506 - 20960 (+)
Type: CAZyme
Location: 19506 - 20960 (+)
Gene ID: HRGMv2_1628_40_21
Type: TC
Location: 21008 - 22522 (+)
Type: TC
Location: 21008 - 22522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Adlercreutzia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1628_40_19 | vegetarian > omnivore | 1.49974 | 0.01054 |