Cluster: HRGMv2_1627_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1627
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1627_5 | HRGMv2_1627_5_117 | 139993 | 140862 | + | 3.A.1.11.6 |
| TC | HRGMv2_1627_5 | HRGMv2_1627_5_118 | 140859 | 141671 | + | 3.A.1.139.2 |
| pfam | HRGMv2_1627_5 | HRGMv2_1627_5_119 | 141830 | 143434 | + | DUF87 | HerA_C |
| CAZyme | HRGMv2_1627_5 | HRGMv2_1627_5_120 | 143461 | 144330 | + | GH25 |
Gene ID: HRGMv2_1627_5_117
Type: TC
Location: 139993 - 140862 (+)
Type: TC
Location: 139993 - 140862 (+)
Gene ID: HRGMv2_1627_5_118
Type: TC
Location: 140859 - 141671 (+)
Type: TC
Location: 140859 - 141671 (+)
Gene ID: HRGMv2_1627_5_119
Type: pfam
Location: 141830 - 143434 (+)
Type: pfam
Location: 141830 - 143434 (+)
Gene ID: HRGMv2_1627_5_120
Type: CAZyme
Location: 143461 - 144330 (+)
Type: CAZyme
Location: 143461 - 144330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Adlercreutzia
Species
Adlercreutzia rubneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1627_5_119 | vegetarian > vegan | 1.20440 | 0.03762 |