Cluster: HRGMv2_1627_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1627
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1627_1 | HRGMv2_1627_1_22 | 22810 | 23910 | - | GT28 |
| TC | HRGMv2_1627_1 | HRGMv2_1627_1_23 | 23915 | 25261 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1627_1 | HRGMv2_1627_1_24 | 25266 | 26732 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_1627_1 | HRGMv2_1627_1_25 | 26753 | 27799 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1627_1_22
Type: CAZyme
Location: 22810 - 23910 (-)
Type: CAZyme
Location: 22810 - 23910 (-)
Gene ID: HRGMv2_1627_1_23
Type: TC
Location: 23915 - 25261 (-)
Type: TC
Location: 23915 - 25261 (-)
Gene ID: HRGMv2_1627_1_24
Type: pfam
Location: 25266 - 26732 (-)
Type: pfam
Location: 25266 - 26732 (-)
Gene ID: HRGMv2_1627_1_25
Type: TC
Location: 26753 - 27799 (-)
Type: TC
Location: 26753 - 27799 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Adlercreutzia
Species
Adlercreutzia rubneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1627_1_22 | vegetarian > vegan | 2.29898 | 0.03762 |