Cluster: HRGMv2_1626_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_1626
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1626_9 | HRGMv2_1626_9_39 | 49149 | 51989 | - | 3.A.3.5.15 |
| pfam | HRGMv2_1626_9 | HRGMv2_1626_9_40 | 52278 | 52628 | - | Trns_repr_metal |
| NULL(UNKNOWN) | HRGMv2_1626_9 | HRGMv2_1626_9_41 | 52909 | 53493 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1626_9 | HRGMv2_1626_9_42 | 53605 | 55713 | + | CE4 |
| CAZyme | HRGMv2_1626_9 | HRGMv2_1626_9_43 | 55969 | 56919 | - | GT2 |
| CAZyme | HRGMv2_1626_9 | HRGMv2_1626_9_44 | 57211 | 58443 | - | GT2 |
| pfam | HRGMv2_1626_9 | HRGMv2_1626_9_45 | 58496 | 60232 | - | Glucos_trans_II | Glucos_trans_II |
| CAZyme | HRGMv2_1626_9 | HRGMv2_1626_9_46 | 60539 | 61600 | + | GT2 |
| CAZyme | HRGMv2_1626_9 | HRGMv2_1626_9_47 | 61604 | 62752 | + | GT2 |
Gene ID: HRGMv2_1626_9_39
Type: TC
Location: 49149 - 51989 (-)
Type: TC
Location: 49149 - 51989 (-)
Gene ID: HRGMv2_1626_9_40
Type: pfam
Location: 52278 - 52628 (-)
Type: pfam
Location: 52278 - 52628 (-)
Gene ID: HRGMv2_1626_9_41
Type:
Location: 52909 - 53493 (-)
Type:
Location: 52909 - 53493 (-)
Gene ID: HRGMv2_1626_9_42
Type: CAZyme
Location: 53605 - 55713 (+)
Type: CAZyme
Location: 53605 - 55713 (+)
Gene ID: HRGMv2_1626_9_43
Type: CAZyme
Location: 55969 - 56919 (-)
Type: CAZyme
Location: 55969 - 56919 (-)
Gene ID: HRGMv2_1626_9_44
Type: CAZyme
Location: 57211 - 58443 (-)
Type: CAZyme
Location: 57211 - 58443 (-)
Gene ID: HRGMv2_1626_9_45
Type: pfam
Location: 58496 - 60232 (-)
Type: pfam
Location: 58496 - 60232 (-)
Gene ID: HRGMv2_1626_9_46
Type: CAZyme
Location: 60539 - 61600 (+)
Type: CAZyme
Location: 60539 - 61600 (+)
Gene ID: HRGMv2_1626_9_47
Type: CAZyme
Location: 61604 - 62752 (+)
Type: CAZyme
Location: 61604 - 62752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900547965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1626_9_40 | vegetarian > vegan | 1.28620 | 0.04808 |
| HRGMv2_1626_9_43 | vegetarian > omnivore | 1.74802 | 0.01460 |
| HRGMv2_1626_9_44 | vegetarian > omnivore | 2.44524 | 0.01460 |
| HRGMv2_1626_9_46 | vegetarian > omnivore | 1.54028 | 0.01460 |