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Cluster: HRGMv2_1626_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1626_6 HRGMv2_1626_6_58 60623 61483 - 3.A.1.3.27
NULL(UNKNOWN) HRGMv2_1626_6 HRGMv2_1626_6_59 61894 62430 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1626_6 HRGMv2_1626_6_60 62473 63237 - 3.A.1.3.8
TC HRGMv2_1626_6 HRGMv2_1626_6_61 63241 63915 - 3.A.1.3.25
TC HRGMv2_1626_6 HRGMv2_1626_6_62 63896 64555 - 3.A.1.3.2
TC HRGMv2_1626_6 HRGMv2_1626_6_63 64901 66694 + 3.A.1.106.3
STP HRGMv2_1626_6 HRGMv2_1626_6_64 66783 67043 + HMA
CAZyme HRGMv2_1626_6 HRGMv2_1626_6_65 67166 68413 - GT28
NULL(UNKNOWN) HRGMv2_1626_6 HRGMv2_1626_6_66 68613 68831 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1626_6 HRGMv2_1626_6_67 69136 70335 + 2.A.1.2.25
Gene ID: HRGMv2_1626_6_58
Type: TC
Location: 60623 - 61483 (-)
Gene ID: HRGMv2_1626_6_59
Type:
Location: 61894 - 62430 (-)
Gene ID: HRGMv2_1626_6_60
Type: TC
Location: 62473 - 63237 (-)
Gene ID: HRGMv2_1626_6_61
Type: TC
Location: 63241 - 63915 (-)
Gene ID: HRGMv2_1626_6_62
Type: TC
Location: 63896 - 64555 (-)
Gene ID: HRGMv2_1626_6_63
Type: TC
Location: 64901 - 66694 (+)
Gene ID: HRGMv2_1626_6_64
Type: STP
Location: 66783 - 67043 (+)
Gene ID: HRGMv2_1626_6_65
Type: CAZyme
Location: 67166 - 68413 (-)
Gene ID: HRGMv2_1626_6_66
Type:
Location: 68613 - 68831 (+)
Gene ID: HRGMv2_1626_6_67
Type: TC
Location: 69136 - 70335 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1626_6_67 vegetarian > omnivore 2.32331 0.01460

🧭 Explore Read Mapping of CGC

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