Cluster: HRGMv2_1625_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1625
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1625_10 | HRGMv2_1625_10_22 | 28693 | 29940 | + | GT28 |
| STP | HRGMv2_1625_10 | HRGMv2_1625_10_23 | 30064 | 30324 | - | HMA |
| TC | HRGMv2_1625_10 | HRGMv2_1625_10_24 | 30428 | 32326 | - | 3.A.1.106.3 |
| TC | HRGMv2_1625_10 | HRGMv2_1625_10_25 | 32774 | 33433 | + | 3.A.1.3.2 |
| TC | HRGMv2_1625_10 | HRGMv2_1625_10_26 | 33414 | 34088 | + | 3.A.1.3.25 |
| TC | HRGMv2_1625_10 | HRGMv2_1625_10_27 | 34092 | 34856 | + | 3.A.1.3.8 |
| TC | HRGMv2_1625_10 | HRGMv2_1625_10_28 | 35352 | 36212 | + | 3.A.1.3.27 |
Gene ID: HRGMv2_1625_10_22
Type: CAZyme
Location: 28693 - 29940 (+)
Type: CAZyme
Location: 28693 - 29940 (+)
Gene ID: HRGMv2_1625_10_23
Type: STP
Location: 30064 - 30324 (-)
Type: STP
Location: 30064 - 30324 (-)
Gene ID: HRGMv2_1625_10_24
Type: TC
Location: 30428 - 32326 (-)
Type: TC
Location: 30428 - 32326 (-)
Gene ID: HRGMv2_1625_10_25
Type: TC
Location: 32774 - 33433 (+)
Type: TC
Location: 32774 - 33433 (+)
Gene ID: HRGMv2_1625_10_26
Type: TC
Location: 33414 - 34088 (+)
Type: TC
Location: 33414 - 34088 (+)
Gene ID: HRGMv2_1625_10_27
Type: TC
Location: 34092 - 34856 (+)
Type: TC
Location: 34092 - 34856 (+)
Gene ID: HRGMv2_1625_10_28
Type: TC
Location: 35352 - 36212 (+)
Type: TC
Location: 35352 - 36212 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900544455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1625_10_24 | vegetarian > omnivore | 1.87314 | 0.01560 |