Cluster: HRGMv2_1625_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1625
- CGC Family ID: CGCFAM_05286
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1625_9 | HRGMv2_1625_9_13 | 12280 | 13344 | - | GT2 |
| TC | HRGMv2_1625_9 | HRGMv2_1625_9_14 | 13712 | 14848 | + | 9.B.146.1.7 |
| NULL(UNKNOWN) | HRGMv2_1625_9 | HRGMv2_1625_9_15 | 14832 | 15776 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1625_9 | HRGMv2_1625_9_16 | 15888 | 18998 | - | 3.A.1.137.2 |
| TC | HRGMv2_1625_9 | HRGMv2_1625_9_17 | 19005 | 19706 | - | 3.A.1.125.1 |
Gene ID: HRGMv2_1625_9_13
Type: CAZyme
Location: 12280 - 13344 (-)
Type: CAZyme
Location: 12280 - 13344 (-)
Gene ID: HRGMv2_1625_9_14
Type: TC
Location: 13712 - 14848 (+)
Type: TC
Location: 13712 - 14848 (+)
Gene ID: HRGMv2_1625_9_15
Type:
Location: 14832 - 15776 (-)
Type:
Location: 14832 - 15776 (-)
Gene ID: HRGMv2_1625_9_16
Type: TC
Location: 15888 - 18998 (-)
Type: TC
Location: 15888 - 18998 (-)
Gene ID: HRGMv2_1625_9_17
Type: TC
Location: 19005 - 19706 (-)
Type: TC
Location: 19005 - 19706 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900544455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1625_9_13 | vegetarian > omnivore | 2.10345 | 0.01560 |
| HRGMv2_1625_9_16 | vegetarian > omnivore | 1.25388 | 0.01560 |