Cluster: HRGMv2_1625_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_1625
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_60 | 70665 | 73400 | + | GT2 | GT2 |
| pfam | HRGMv2_1625_3 | HRGMv2_1625_3_61 | 73539 | 75464 | + | DUF6541 |
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_62 | 75476 | 76564 | - | GT2 |
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_63 | 76567 | 77628 | - | GT2 |
| pfam | HRGMv2_1625_3 | HRGMv2_1625_3_64 | 77936 | 79675 | + | Glucos_trans_II |
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_65 | 79727 | 81010 | + | GT2 |
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_66 | 81229 | 82185 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_1625_3 | HRGMv2_1625_3_67 | 82402 | 82668 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1625_3 | HRGMv2_1625_3_68 | 82784 | 84892 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_1625_3 | HRGMv2_1625_3_69 | 85123 | 85632 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1625_3 | HRGMv2_1625_3_70 | 85868 | 86218 | + | Trns_repr_metal |
| TC | HRGMv2_1625_3 | HRGMv2_1625_3_71 | 86459 | 89215 | + | 3.A.3.5.15 |
Gene ID: HRGMv2_1625_3_60
Type: CAZyme
Location: 70665 - 73400 (+)
Type: CAZyme
Location: 70665 - 73400 (+)
Gene ID: HRGMv2_1625_3_61
Type: pfam
Location: 73539 - 75464 (+)
Type: pfam
Location: 73539 - 75464 (+)
Gene ID: HRGMv2_1625_3_62
Type: CAZyme
Location: 75476 - 76564 (-)
Type: CAZyme
Location: 75476 - 76564 (-)
Gene ID: HRGMv2_1625_3_63
Type: CAZyme
Location: 76567 - 77628 (-)
Type: CAZyme
Location: 76567 - 77628 (-)
Gene ID: HRGMv2_1625_3_64
Type: pfam
Location: 77936 - 79675 (+)
Type: pfam
Location: 77936 - 79675 (+)
Gene ID: HRGMv2_1625_3_65
Type: CAZyme
Location: 79727 - 81010 (+)
Type: CAZyme
Location: 79727 - 81010 (+)
Gene ID: HRGMv2_1625_3_66
Type: CAZyme
Location: 81229 - 82185 (+)
Type: CAZyme
Location: 81229 - 82185 (+)
Gene ID: HRGMv2_1625_3_67
Type:
Location: 82402 - 82668 (+)
Type:
Location: 82402 - 82668 (+)
Gene ID: HRGMv2_1625_3_68
Type: CAZyme
Location: 82784 - 84892 (-)
Type: CAZyme
Location: 82784 - 84892 (-)
Gene ID: HRGMv2_1625_3_69
Type:
Location: 85123 - 85632 (+)
Type:
Location: 85123 - 85632 (+)
Gene ID: HRGMv2_1625_3_70
Type: pfam
Location: 85868 - 86218 (+)
Type: pfam
Location: 85868 - 86218 (+)
Gene ID: HRGMv2_1625_3_71
Type: TC
Location: 86459 - 89215 (+)
Type: TC
Location: 86459 - 89215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp900544455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1625_3_66 | vegetarian > omnivore | 1.48671 | 0.01560 |
| HRGMv2_1625_3_68 | vegetarian > omnivore | 1.10911 | 0.01560 |
| HRGMv2_1625_3_69 | vegetarian > omnivore | 1.14272 | 0.01560 |