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Cluster: HRGMv2_1615_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1615_1 HRGMv2_1615_1_642 803593 806601 + GH2
NULL(UNKNOWN) HRGMv2_1615_1 HRGMv2_1615_1_643 806605 807060 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1615_1 HRGMv2_1615_1_644 807214 808677 + 2.A.3.7.4
STP HRGMv2_1615_1 HRGMv2_1615_1_645 809099 809347 + PTS-HPr
STP HRGMv2_1615_1 HRGMv2_1615_1_646 809536 809778 + FeoA
TC HRGMv2_1615_1 HRGMv2_1615_1_647 809819 810040 + 9.A.8.1.6
TC HRGMv2_1615_1 HRGMv2_1615_1_648 810164 812491 + 9.A.8.1.6
Gene ID: HRGMv2_1615_1_642
Type: CAZyme
Location: 803593 - 806601 (+)
Gene ID: HRGMv2_1615_1_643
Type:
Location: 806605 - 807060 (+)
Gene ID: HRGMv2_1615_1_644
Type: TC
Location: 807214 - 808677 (+)
Gene ID: HRGMv2_1615_1_645
Type: STP
Location: 809099 - 809347 (+)
Gene ID: HRGMv2_1615_1_646
Type: STP
Location: 809536 - 809778 (+)
Gene ID: HRGMv2_1615_1_647
Type: TC
Location: 809819 - 810040 (+)
Gene ID: HRGMv2_1615_1_648
Type: TC
Location: 810164 - 812491 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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