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Cluster: HRGMv2_1615_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1615_1 HRGMv2_1615_1_162 174717 176222 + GH77
CAZyme HRGMv2_1615_1 HRGMv2_1615_1_163 176352 178619 + GT35
TC HRGMv2_1615_1 HRGMv2_1615_1_164 179075 180274 - 3.A.1.1.22
TC HRGMv2_1615_1 HRGMv2_1615_1_165 180343 181182 - 3.A.1.1.45
TC HRGMv2_1615_1 HRGMv2_1615_1_166 181182 182036 - 3.A.1.1.45
TC HRGMv2_1615_1 HRGMv2_1615_1_167 182124 183440 - 3.A.1.1.45
TF HRGMv2_1615_1 HRGMv2_1615_1_168 183747 184466 - GntR
NULL(UNKNOWN) HRGMv2_1615_1 HRGMv2_1615_1_169 184550 184669 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1615_1 HRGMv2_1615_1_170 184691 187141 + 4.A.1.1.8
Gene ID: HRGMv2_1615_1_162
Type: CAZyme
Location: 174717 - 176222 (+)
Gene ID: HRGMv2_1615_1_163
Type: CAZyme
Location: 176352 - 178619 (+)
Gene ID: HRGMv2_1615_1_164
Type: TC
Location: 179075 - 180274 (-)
Gene ID: HRGMv2_1615_1_165
Type: TC
Location: 180343 - 181182 (-)
Gene ID: HRGMv2_1615_1_166
Type: TC
Location: 181182 - 182036 (-)
Gene ID: HRGMv2_1615_1_167
Type: TC
Location: 182124 - 183440 (-)
Gene ID: HRGMv2_1615_1_168
Type: TF
Location: 183747 - 184466 (-)
Gene ID: HRGMv2_1615_1_169
Type:
Location: 184550 - 184669 (-)
Gene ID: HRGMv2_1615_1_170
Type: TC
Location: 184691 - 187141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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