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Cluster: HRGMv2_1615_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1615_1 HRGMv2_1615_1_923 1152233 1153909 + 3.A.1.5.35
TC HRGMv2_1615_1 HRGMv2_1615_1_924 1154066 1155103 + 3.A.1.5.37
TC HRGMv2_1615_1 HRGMv2_1615_1_925 1155118 1156053 + 3.A.1.5.11
TC HRGMv2_1615_1 HRGMv2_1615_1_926 1156056 1157147 + 3.A.1.5.34
TC HRGMv2_1615_1 HRGMv2_1615_1_927 1157147 1158175 + 3.A.1.5.36
STP HRGMv2_1615_1 HRGMv2_1615_1_928 1158923 1161268 + GAF | SpoIIE
STP HRGMv2_1615_1 HRGMv2_1615_1_929 1161347 1162093 + STAS
CAZyme HRGMv2_1615_1 HRGMv2_1615_1_930 1162679 1164412 + GH13_30
Gene ID: HRGMv2_1615_1_923
Type: TC
Location: 1152233 - 1153909 (+)
Gene ID: HRGMv2_1615_1_924
Type: TC
Location: 1154066 - 1155103 (+)
Gene ID: HRGMv2_1615_1_925
Type: TC
Location: 1155118 - 1156053 (+)
Gene ID: HRGMv2_1615_1_926
Type: TC
Location: 1156056 - 1157147 (+)
Gene ID: HRGMv2_1615_1_927
Type: TC
Location: 1157147 - 1158175 (+)
Gene ID: HRGMv2_1615_1_928
Type: STP
Location: 1158923 - 1161268 (+)
Gene ID: HRGMv2_1615_1_929
Type: STP
Location: 1161347 - 1162093 (+)
Gene ID: HRGMv2_1615_1_930
Type: CAZyme
Location: 1162679 - 1164412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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