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Cluster: HRGMv2_1613_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1613_3 HRGMv2_1613_3_27 27572 28573 - GT2
pfam HRGMv2_1613_3 HRGMv2_1613_3_28 28576 29286 - Hexapep | Hexapep_2
CAZyme HRGMv2_1613_3 HRGMv2_1613_3_29 29302 30339 - GT2
NULL(UNKNOWN) HRGMv2_1613_3 HRGMv2_1613_3_30 30367 30909 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1613_3 HRGMv2_1613_3_31 30893 31768 - LicD
CAZyme HRGMv2_1613_3 HRGMv2_1613_3_32 31770 32879 - GT4
pfam HRGMv2_1613_3 HRGMv2_1613_3_33 32876 33985 - Epimerase_2
CAZyme HRGMv2_1613_3 HRGMv2_1613_3_34 33978 34784 - GT26
TC HRGMv2_1613_3 HRGMv2_1613_3_35 34771 35520 - 9.B.18.1.2
Gene ID: HRGMv2_1613_3_27
Type: CAZyme
Location: 27572 - 28573 (-)
Gene ID: HRGMv2_1613_3_28
Type: pfam
Location: 28576 - 29286 (-)
Gene ID: HRGMv2_1613_3_29
Type: CAZyme
Location: 29302 - 30339 (-)
Gene ID: HRGMv2_1613_3_30
Type:
Location: 30367 - 30909 (-)
Gene ID: HRGMv2_1613_3_31
Type: pfam
Location: 30893 - 31768 (-)
Gene ID: HRGMv2_1613_3_32
Type: CAZyme
Location: 31770 - 32879 (-)
Gene ID: HRGMv2_1613_3_33
Type: pfam
Location: 32876 - 33985 (-)
Gene ID: HRGMv2_1613_3_34
Type: CAZyme
Location: 33978 - 34784 (-)
Gene ID: HRGMv2_1613_3_35
Type: TC
Location: 34771 - 35520 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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