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Cluster: HRGMv2_1613_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1613_2 HRGMv2_1613_2_117 127503 127946 + 4.A.6.1.16
pfam HRGMv2_1613_2 HRGMv2_1613_2_118 127946 128227 + YajC
TC HRGMv2_1613_2 HRGMv2_1613_2_119 128264 128746 + 4.A.6.1.4
TC HRGMv2_1613_2 HRGMv2_1613_2_120 128837 129637 + 4.A.6.1.4
TC HRGMv2_1613_2 HRGMv2_1613_2_121 129627 130709 + 4.A.6.1.4
TF HRGMv2_1613_2 HRGMv2_1613_2_122 130895 131626 + GntR
STP HRGMv2_1613_2 HRGMv2_1613_2_123 131741 132907 + SIS | SIS
CAZyme HRGMv2_1613_2 HRGMv2_1613_2_124 133028 134197 + CE9
Gene ID: HRGMv2_1613_2_117
Type: TC
Location: 127503 - 127946 (+)
Gene ID: HRGMv2_1613_2_118
Type: pfam
Location: 127946 - 128227 (+)
Gene ID: HRGMv2_1613_2_119
Type: TC
Location: 128264 - 128746 (+)
Gene ID: HRGMv2_1613_2_120
Type: TC
Location: 128837 - 129637 (+)
Gene ID: HRGMv2_1613_2_121
Type: TC
Location: 129627 - 130709 (+)
Gene ID: HRGMv2_1613_2_122
Type: TF
Location: 130895 - 131626 (+)
Gene ID: HRGMv2_1613_2_123
Type: STP
Location: 131741 - 132907 (+)
Gene ID: HRGMv2_1613_2_124
Type: CAZyme
Location: 133028 - 134197 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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