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Cluster: HRGMv2_1613_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1613_1 HRGMv2_1613_1_28 35470 37146 + 3.A.1.5.35
TC HRGMv2_1613_1 HRGMv2_1613_1_29 37303 38340 + 3.A.1.5.37
TC HRGMv2_1613_1 HRGMv2_1613_1_30 38355 39290 + 3.A.1.5.11
TC HRGMv2_1613_1 HRGMv2_1613_1_31 39293 40384 + 3.A.1.5.37
TC HRGMv2_1613_1 HRGMv2_1613_1_32 40384 41412 + 3.A.1.5.36
STP HRGMv2_1613_1 HRGMv2_1613_1_33 42155 44500 + GAF | SpoIIE
STP HRGMv2_1613_1 HRGMv2_1613_1_34 44582 45328 + STAS
CAZyme HRGMv2_1613_1 HRGMv2_1613_1_35 46258 47991 + GH13_30
Gene ID: HRGMv2_1613_1_28
Type: TC
Location: 35470 - 37146 (+)
Gene ID: HRGMv2_1613_1_29
Type: TC
Location: 37303 - 38340 (+)
Gene ID: HRGMv2_1613_1_30
Type: TC
Location: 38355 - 39290 (+)
Gene ID: HRGMv2_1613_1_31
Type: TC
Location: 39293 - 40384 (+)
Gene ID: HRGMv2_1613_1_32
Type: TC
Location: 40384 - 41412 (+)
Gene ID: HRGMv2_1613_1_33
Type: STP
Location: 42155 - 44500 (+)
Gene ID: HRGMv2_1613_1_34
Type: STP
Location: 44582 - 45328 (+)
Gene ID: HRGMv2_1613_1_35
Type: CAZyme
Location: 46258 - 47991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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