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Cluster: HRGMv2_1613_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1613_24 HRGMv2_1613_24_11 10422 11927 + GH77
CAZyme HRGMv2_1613_24 HRGMv2_1613_24_12 12057 14324 + GT35
TC HRGMv2_1613_24 HRGMv2_1613_24_13 14700 15899 - 3.A.1.1.22
TC HRGMv2_1613_24 HRGMv2_1613_24_14 15967 16806 - 3.A.1.1.45
TC HRGMv2_1613_24 HRGMv2_1613_24_15 16806 17660 - 3.A.1.1.45
TC HRGMv2_1613_24 HRGMv2_1613_24_16 17748 19064 - 3.A.1.1.45
TF HRGMv2_1613_24 HRGMv2_1613_24_17 19371 20090 - GntR
TC HRGMv2_1613_24 HRGMv2_1613_24_18 20300 22768 + 4.A.1.1.8
Gene ID: HRGMv2_1613_24_11
Type: CAZyme
Location: 10422 - 11927 (+)
Gene ID: HRGMv2_1613_24_12
Type: CAZyme
Location: 12057 - 14324 (+)
Gene ID: HRGMv2_1613_24_13
Type: TC
Location: 14700 - 15899 (-)
Gene ID: HRGMv2_1613_24_14
Type: TC
Location: 15967 - 16806 (-)
Gene ID: HRGMv2_1613_24_15
Type: TC
Location: 16806 - 17660 (-)
Gene ID: HRGMv2_1613_24_16
Type: TC
Location: 17748 - 19064 (-)
Gene ID: HRGMv2_1613_24_17
Type: TF
Location: 19371 - 20090 (-)
Gene ID: HRGMv2_1613_24_18
Type: TC
Location: 20300 - 22768 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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