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Cluster: HRGMv2_1612_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1612_32 HRGMv2_1612_32_3 1610 4060 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1612_32 HRGMv2_1612_32_4 4082 4201 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1612_32 HRGMv2_1612_32_5 4285 5004 + GntR
TC HRGMv2_1612_32 HRGMv2_1612_32_6 5311 6627 + 3.A.1.1.45
TC HRGMv2_1612_32 HRGMv2_1612_32_7 6715 7569 + 3.A.1.1.45
TC HRGMv2_1612_32 HRGMv2_1612_32_8 7569 8408 + 3.A.1.1.45
TC HRGMv2_1612_32 HRGMv2_1612_32_9 8477 9676 + 3.A.1.1.22
CAZyme HRGMv2_1612_32 HRGMv2_1612_32_10 10142 12409 - GT35
CAZyme HRGMv2_1612_32 HRGMv2_1612_32_11 12538 14043 - GH77
Gene ID: HRGMv2_1612_32_3
Type: TC
Location: 1610 - 4060 (-)
Gene ID: HRGMv2_1612_32_4
Type:
Location: 4082 - 4201 (+)
Gene ID: HRGMv2_1612_32_5
Type: TF
Location: 4285 - 5004 (+)
Gene ID: HRGMv2_1612_32_6
Type: TC
Location: 5311 - 6627 (+)
Gene ID: HRGMv2_1612_32_7
Type: TC
Location: 6715 - 7569 (+)
Gene ID: HRGMv2_1612_32_8
Type: TC
Location: 7569 - 8408 (+)
Gene ID: HRGMv2_1612_32_9
Type: TC
Location: 8477 - 9676 (+)
Gene ID: HRGMv2_1612_32_10
Type: CAZyme
Location: 10142 - 12409 (-)
Gene ID: HRGMv2_1612_32_11
Type: CAZyme
Location: 12538 - 14043 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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